In the pharmaceutical manufacturing industry, maintaining high standards of cleanliness is not just a best practice―it is a regulatory necessity. If you’ve ever wondered why cleaning validation is required—or more broadly, why is cleaning validation important?, it’s because it ensures that any residues from previously manufactured products are thoroughly removed from equipment before the next batch is made. This prevents cross-contamination in pharma, ensures product quality, and protects patient safety.
The stringent regulations governing cleaning validation in GMP environments have evolved in response to several contamination incidents and product recalls that posed significant health risks. In this article, you’ll explore essential FDA cleaning validation guidelines and global regulatory expectations, the challenges you face in meeting those standards, and how ValGenesis iClean can simplify the entire process for your organization and deliver a reliable cleaning validation system.
What is Cleaning Validation in Pharma? A Look at Key Regulatory Documents
Cleaning validation, especially in regulated industries, is governed by a wide range of regulations and guidance documents. And yet, manual cleaning validation efforts often fall short, contributing to contamination—which remains a leading cause of drug recalls, according to the FDA.
Listed below are some of the most relevant agency directives outlining expectations for an effective cleaning validation program. While this list is comprehensive, it is not exhaustive, as many regulations and guidelines address cleaning validation in various contexts.
- FDA 21 CFR Part 211.67: This section of Title 21 of the Code of Federal Regulations (CFR) mandates regular cleaning and maintenance of equipment to prevent contamination. It requires detailed written procedures, including schedules, methods, materials, and responsibilities. When you rely on manual cleaning validation methods, compliance can become overwhelming due to the need for constant documentation updates.
- FDA 21 CFR Part 211.182: This section requires you to maintain logs for cleaning, maintenance, and use of major equipment. Logs must capture the date, time, batch number, and lot number―and also document who performed the activity and how it was conducted.
- ICH Q7 for Good Manufacturing Practices: This guideline emphasizes the importance of cleaning procedures in active pharmaceutical ingredient (API) manufacturing. It calls for comprehensive risk assessments and impact evaluations to prevent cross-contamination in pharma.
- APIC Guidance on Aspects of Cleaning Validation in API Plants: This document offers detailed guidance on setting acceptance criteria, determining cleaning levels, bracketing, worst-case rating, residue measurement, and drafting a cleaning validation protocol.
- ASTM E3106-18: This guidance emphasizes a lifecycle approach to cleaning validation, including development, qualification, and verification, with a focus on cleaning product contact surfaces. It advocates using risk assessments and statistical tools throughout development and validation phases. The application of risk assessment should not be limited to cleaning chemistry and process but also cover equipment and procedural hazards, equipment design, and cleaning equipment design and qualification.
- EMA EudraLex Volume 4, Annex 15: This document outlines qualification and validation processes, including cleaning validation. It specifies requirements for risk assessments, cleaning agent selection, and verification of cleaning effectiveness. Managing these tasks manually often leads to inconsistencies and noncompliance―especially in multi-product facilities.
- ISPE Guide on Cleaning Validation Lifecycle: This comprehensive guide outlines best practices across the entire cleaning validation lifecycle, from design to routine monitoring. It includes methods for establishing residue limits and validating cleaning processes. Manual adherence to such methods is labor-intensive and increases the risk of oversight.
Regulatory guidelines like these reinforce the importance of a comprehensive cleaning validation system and highlight why a manual approach often leads to more harm than good.
Why Cleaning Validation is Challenging—and What's at Stake
Despite its critical role, cleaning validation in pharma remains a complex and demanding process. Common difficulties include:
- Manual Methods: Traditional approaches for sampling, testing, and documentation are time-consuming and error-prone. You’re more likely to see inconsistent results and higher compliance risks in manual cleaning validation.
- Calculations: Accurate calculations of residue and carryover limits, shared surface areas, and cleaning agent concentrations are essential―but often complicated. These calculations require a deep understanding of the solubility and chemistry of residues, which varies by product and equipment.
- Limit selection: Your acceptance criteria must align with detection limits. To study residue cleaning accurately, you need a solid understanding of established analytical methods.
- Risk Assessments: You must identify contamination risks related to equipment design, process flow, and product characteristics. These assessments are inherently complex and require comprehensive documentation.
- Impact Assessments: Every change—whether in product, agents, or equipment—requires you to evaluate its effect on product quality and patient safety. Manually tracing those impacts is slow and error-prone.
- Multiple Systems: When data is spread across multiple systems—such as laboratory information management systems (LIMS), manufacturing execution systems (MES), enterprise resource planning (ERP) systems, and even spreadsheets—siloed data and inconsistencies are almost inevitable.
Solving Cleaning Validation Challenges with Digitalization
Managing the data, calculations, assessments, and reports needed to demonstrate that your cleaning validation system is in control is no small task. That’s why adopting a comprehensive digital solution like ValGenesis iClean™ adds measurable value at every level of your organization.
User Level: For operators and quality control personnel, iClean provides an intuitive interface that simplifies data entry and reduces human error. Automated workflows guide users through each step of the cleaning validation process, ensuring consistency and compliance while eliminating rework. Real-time data capture and analysis enable immediate identification and resolution of issues.
Screenshot: Automatic residual calculations eliminate the use of spreadsheets and reduce human errors.
Manager Level: For managers, ValGenesis iClean™ offers robust tools for tracking and monitoring cleaning validation activities. Dashboards provide a real-time overview of the status of all validation activities, highlighting any delays or deviations. Systematic impact assessments enforce required workflows and reduce omissions. Managers can easily generate reports to demonstrate compliance with regulatory requirements, facilitating audits and inspections.

Screenshot: Change impact assessment action item status view.
Executive Level: At the executive level, iClean provides a bird’s-eye view of how your cleaning validation program performs across facilities. Aggregated data helps you identify trends, benchmark performance, and make data-driven decisions to improve operational efficiency and reduce costs. Comprehensive reporting capabilities support strategic planning, ensure regulatory compliance, and accelerate time to market.

Screenshot: Dashboard views provide up-to-date status.
Staying Ahead of Cleaning Validation Regulations
Cleaning validation is undeniably intricate and demanding. It often requires exhaustive documentation, complex processes, and relentless pressure to meet stringent regulatory requirements. These challenges can place significant burdens on resources and personnel, leaving little room for error. At ValGenesis, we understand the unique pressures faced by teams responsible for ensuring compliance and maintaining product integrity.
ValGenesis iClean™ is purposefully designed to address these complexities, offering a transformative solution that alleviates the burdens of traditional validation methods. By digitizing and automating the cleaning validation process, it enhances efficiency and provides a supportive framework for professionals at every level.
Watch the webinar below to learn how digitizing your cleaning validation system with ValGenesis can turn a bottleneck into a competitive advantage.
Digital Cleaning Validation Lifecycle
The industry has moved toward a structured, risk-based lifecycle approach following FDA's Process Validation Lifecycle guidance. See how to automate and digitize your cleaning validation with purpose-built tools.
Cleaning Validation
Rui Almeida
Director - Consulting Services